CDS
| Accession Number | TCMCG016C28880 |
| gbkey | CDS |
| Protein Id | OMO50188.1 |
| Location | complement(join(55450..55894,57272..57798,58883..59678,60301..60368,60500..60561,60901..63982,64091..64153,64274..64342,65638..65673,65806..65940,66027..66091,66183..66264,66428..66510,66681..66749,66998..67133,67514..67554,67656..67789,67863..67951,68039..68119,68270..68377,68572..68652,70330..70389)) |
| Organism | Corchorus capsularis |
| locus_tag | CCACVL1_30579 |
Protein
| Length | 2103aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215142; BioSample:SAMN03290679; |
| db_source | AWWV01016250.1 |
| Definition | SNF2-related protein [Corchorus capsularis] |
| Locus_tag | CCACVL1_30579 |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11320
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGCTTCCAAGGGACCAAGGTCTAGGATTGAGCATGAGACAAGAGCTAGGCGTCAAAAGGCACTTGAAGCGCCTAGAGAGCCTCAACGTCCTAAAACGCATTGGGATCATGTTTTAGAAGAAATGGTCTGGTTGTCGAAGGACTTTGAGTCTGAAAGGAAATGGAAGCTGGCTCAGGCAAAGAAGGTTGCATTAAGAGCCACCAAGGGCATGTTGGATCAGGCCACCAGGGGGGAGAAGAAGTTGAAGGAAGAGGAACATCGGATGCGAAAAATTGCTCTTAATATATCCAAGGACGTGAAGAAATTCTGGATGAAAATTGAGAAATTGGTTCTTTATAAGCATCAAATGGAGCTTGATGAGAAAAAGAAAAAGGCACTTGATAAACAGCTTGAGTTTCTTCTAGGGCAAACTGAGAGGTACTCAACAATGTTGGCAGAAAACTTGGTGGACCCACATAAACCTGTGCAACAATCTCCTGCTCAGTACAAACTAAAGTCTCCTGTTAAAGAAGATGTGAATGATGTTGATCAATCGTTGGATTTGAATACTGAGGCGGACGATGATTTTGACGTAAATTCTGAAGAAGAATCAGAAGATGATGAGCAAACAATAGAAGAAGATGAGGCTCTTATAACTGCAGAAGAAAGACAAGAAGAACTTGCAGCTTTGCACAGTGAAATAGATCTTCCACTTCAGGAGCTCCTTAAACGTTATGTTGTGCAAAGAGTTAGCAGAGAAAGTAGTCCAGAAAAGGGGGAGGATGCAAAAGAATCGATACTGGTGCCAGATGATAACATAAGTTCTGCAGTTAGCAGAGAAAGTAGTACCGAAAAGGGGACAAAAGAGTCGATACTGGTGGTGCCAGATGATAACAGTAAGCAAGTTTCTGCAGTTAGCAGAGAAAGTAGTCCAGAAAAGGGGGAGGATGCAAAAGAGTCGATACTGGTGCCAGATGATAACAGCAATAATAACAATAATTCTGCTTCGAATAAAGTTGAGACAACCAACTCCATTGTTCGTTGTTCTAATGAAAGCAATGGCGGCTTGTCCATATCAGAAAACCGCTCATTAGACGTTGAGGCAACCCCCACCAGAAATATATCAGAAAGCTCTGGGGAGCTAGCCAAAGAAGATATTCCTTATGATTTCAGTGAGGAGCAGGAGGATGGCGATTTTACCCTTGCTGAAGAAGAGAAGGATGATGAGACAACCCTATCTGAGGAGGAGGAACTTGCGAAAGTAGATTCAAGCAATCCCATAGATGAGATTGCTTTACTGCAAAAGGAGAGTGAAATTCCCGTGGAAGAATTGCTTGCTAGATATAGACAGGACTTCAGTGGTGATGATGCGTCTGGGGATGAATCTGAGTATGCCTCAGCTTTGTCAGAAGACCTCTTGGATTCGCCAGCAAATCAAAATGTTGAAGCAAGAGAAGAGAGTGGTACTAAGAATGAAGTGGAATCCAGTCCTGTCCAGGGAGTTGTAAATCACTCTGCGGAAGAGGAAGCAAGCCCTGATAGAAATTTTGAAGATGGAAAGGAAAGTGAAAATAGAATTGCTGATGCAGCTGCCGCTGCAAGATCAGCACAACCAACAGGCAATACATTCTCAACTACTAATGTTCGTACAAAGTTCCCTTTTCTTCTCAAACACCCCCTTCGTGAATATCAGCATATTGGCTTGGACTGGCTTGTTACAATGTATGAAAAAAGGTTAAATGGAATTCTAGCTGATGAAATGGGACTTGGAAAGACGATTATGACAATTGCTCTACTTGCACACCTTGCTTGTGAAAAGGGAATATGGGGTCCTCATCTCATTGTGGTTCCGACAAGTGTCATGCTTAACTGGGAAACCGAGTTTCTTAGATGGTGTCCTGCATTCAAAATTCTGACATACTTTGGAAGTGCCAAAGAGCGCAAATTCAAGAGGCAGGGCTGGTTGAAACCAAACTCATTTCATGTATGCATTACGACTTACAGATTGGTTATACAAGATTCTAAAGTCTTCAAGAGGAAGAAGTGGAAATACTTAATTTTGGATGAAGCTCATCTCATCAAAAACTGGAAATCCCAAAGATGGCAAACTCTTTTGAACTTCAATTCAAAAAGGCGTATTTTGTTGACTGGTACACCGCTGCAGAATGATCTCATGGAACTTTGGTCACTAATGCATTTTTTGATGCCCCACGTTTTTCAGTCTCATCAAGAATTCAAGGATTGGTTCAGTAATCCTATATCAGGGATGATAGATGGACAAGAAAGAGTGAACAAAGAGGTTGTTGACCGTTTGCATAATGTCCTCCGTCCATTTATACTGCGCCGATTGAAAAGGGATGTTGAAAAACAGCTTCCAATGAAACATGAGCATGTCATATATTGTAGGCTCTCCAGAAGGCAGCGTAACTTATATGAAGACTTTATTGCTAGCTCAGAGACACAAGCCACTCTTGCAAATGCCAATTTTTTTGGGATGATCAGCATTATTATGCAACTTCGCAAAGTTTGTAACCATCCTGACTTATTTGAGGGTCGCCCAATTGTTAGTTCTTTTGATATGTGTGGTATCGATATCCAACTGAGTTCTTCAGTTTGTTCAATTCTTTCAACTGGTCCATTTTCAACCATAGATCTTAAGAATTTGGGATTGGTATTTACTCATCTTGATTTTAGCATGACTTCTTGGGAGAGTGATGAAGTACAGGCACTGGCTACTCCATCAAGTTTAATAGAAGAACTTACCGACCAGGATAATCTTGAGGAAGTTGGGCCCTTTTCTAAACATCAGAAAAACTTGCTTGGGACAAATATTTTTGAAGAGATTCGAAAGGCTTTAAGGGAGGAGAGGCTAAGAGAAGCAGAAGAGCGAGCGGCATCAATTGCATGGTGGAACTCTTTGAGATGCTGCAGAAAACCAGTTTACTCAACAACATTATGCGAGCTGCTTACAGTGAAGCATTCTGCATTTGATATTCAAAATCAAAAAGCTGACCGTCGTTCCTACTCATACTCCTCTAGACTTGTTGAGATTATTCTTTCCCCAGTTGATCGCTTCCAGACAGTGATTCATCTGGTTGAGTCCTTCATGTTTGTAATCCCAGCTGCAAGGGCTCCACCACCAGTTTGTTGGTGTAGCAAAACAGGAACTTCTGCATTTTTGCATTCAACTTATATAGAGAAATGTGCTAAAACATTGTTTCCCCTCTTAACACCTATTAGACCTGCAATTGTGCGGAGGCAAGTATATTTTCCTGACAGGCGACTTATACAGTTTGATTGTGGCAAGTTGCAGGAGCTTGCAGTTCTGTTACGGAGATTGAAGTCTGAAGGTCATCGAGCATTAATCTTTACCCAAATGACCAAGATGCTTGACATTTTGGAGGCATTCATAAATCTGTATGGATATACTTACATGCGTCTAGATGGATCCACTCAACCTGAGGAGCGGCAAACATTAATGCAGCGATTCAACACTAATCCAAAAATTTTTCTCTTCATCTTATCAACCCGTAGTGGAGGAGTTGGTATTAATCTTGTTGGGGCAGATACTGTTATCTTTTATGATAGTGATTGGAATCCTGCCATGGATCAACAAGCTCAAGATCGTTGCCATCGAATAGGACAGACACGTGAAGTGCATATCTATCGTCTAATCAGCGAGAGCACCATTGAAGAGAACATTTTGAAGAAAGCAAATCAGAAGCGTGCCCTTGATGATCTAGTTATACAGAGTGGAGGGTACAATACTGAATTTTTCAAGAAGCTTGATCCTATGGAGTTATTCTCGGGTCATAGGACACTTTCTGTTAAGAGTATTCAGAAGGATAAAAATCACAACAGTGGCATGGAGGTGTCTGTGTCAAATGCTGATGTAGAAGCTGCTTTGAAACATGCAGAAGATGAAGCAGATTACATGGCATTGAAGAAAGTTGAACAGGAAGAGGCTGTTGAAAACCAAGAGTTTACAGAGGAAGCCATGAGCAAACTGGAAGATGATGAGTTAGTAAATGAGGATGATGTGAAGGCCGATGAGTCAGCTGATCAGGGTGGATGTATGACTACCCTAAATAAAGATAATCGCCTGATGTTTAATGGAGGTCTCCCCATTGAGGAGAAAGCTCTCACTTTTGCTGGCAAAGAAGATGATGCTGATATGCTGGCTGATGTCAAGCAGATCGCGGCAGCCGCTGCAGCAGCAGGACAAGCTATCTCTTCCTTTGAGAATCAGTTAAGACCAATAGACCAATATGCAATCCGTTTTCTGGAATTGTGGGATCCACTTATAGACAAGGGAGCAATAGAATCTGAAGTTAGGTTTGAGGAGGCAGAATGGGAACTTGATCGCATTGAAAAGTACAAGGAGGAAATGGAAGCTGAGATTGATGATGATGAGGAACCGCTAGTGTATGAGAAATGGGATGCTGATTTTGCTACTGAAGCATATCGACAGCAAGTTGCTTTGGCTCAACATCAGTTAATGGAAGAACTGGAATATGAAGCCAAAGAGAAGGAACTGGCTGATGATGGAAATTTTGATGCTATGAATGAGATGGTTAGTGAACCTAAGTCAAAATCTAAGAAGAAGAAGAAGCCAAAGAAAGCCAAGTTTAAATCTCTGAAGAAGGGATCTTTAAGTTCTGAACTAAAACCTGCTAAAGAAGAGACAAAATCAGAACCTATGTCCATAGATGATGATGACAATTCTCATGAAGAGCTCTCATATTCGGATGTTGTATCACCATCTTCAAATGGGCTCAAAAAACGTAAGAAGGTTGACATGATAGTTCATGACGCTGAAGAAGTGAAGAGCTCAAAGAAGAAGCCTAAAAAATCCAAGAAGCCTCCTATGGAGCTACATCCTGTAGACGATCCTAGTGCAAGTCGTAAGAGGAATGATGACTGTGCAGAGGTAAAACCATGTGCGGGCCTTGCTATTGAGCTTGAGCAGAAACCTGCTGGCAGGAGCAGAACAGGAGGGAAATTTTCTATTACTTCTATGCCTTTAAAAAGAGTCTTAATGATAAAACCAGAGAAATTAAAGAAGGGAAATATCTGGTCAAGAGATTGTGTTCCATCCCCTGATTCTTGGTTGCCACAGGAGGATGCTATATTATGTGCTGTCGTGCATGAATATGGCCCACATTGGAGTTTGGTTAGTGAAACTCTCTACAGCATGACTGCAGGAGGCTTTTACCGGGGAAGATATCGCCATCCGGTTCATTGTTGTGAGAGGTACCGGGAACTAATTCAAAGACATATTTTGGCTGCACCAGATAGTTCAGTTAATGAAAAGATCAGCAATGCAGGCTCTGGAAAAGCTCTTCTGAAAGTAACAGAGGATAACATTCAAATGCTGCTTAATGTTGCTGCTCAGCAGCCAGATCATGAGTTACTTCTTCAAAAGCACTTCACTGCCTTACTCTCATCTGTTTGGAGAGTGACACTTCGTCCTGAGCACCGACAAAGTGTCTCAACATCTCGAAATGGTATTCGTTTAGGAGGAAGGTTTGTCAGTCCTTTTCTCAGCCACACACTGCAGAGTTCTGCTAAAGAACCAGCACAGAGGATGAAGTTTACAAATTTGCGGGAATGTAGCAAGTTGTTATCAGATGCACTCAATGATGCTAGTGATAGACAACAGAGTGACACAGTTTCCCACTCTGATAGGAGATATGATCCTGTGATTGCTGAAAGTCTGGAGTTAACACTGGAGATCCAGGGGGATAGTTGTGACTCTATGAATTCGTTCCCACCAGTAATAAATGTATCAATTTATGGCTCAGATCTGGTTACATCTATCAACAGGACTCCTGGAGAGGACCTCCATCTCAAGGATTCAAAAGTTGTGCCTGAGAACCGCTTCAGGGCTGCTGCTAGTGCTTGTGTTGGAGGTGGTCTGGGTTGGGCTTCATCTGCCTTCCCAGCAAATGATTCCAGGTCACGGCCAGGATCAAAAATGCAGTCTTTGGGGAAGCACAAGCTGTCTGTCTCTGACACTAGACCTAAATCAAAGCTGAAAAAGGCTTCAGTGGAGCACGGTGATGTACACAACTTATTTTCCGAGCAAGCATTACAATCAGTGACAACAGTATCCCCGAAGGATCCCAACTTAAGATGTGACCTAACATCAATGAGTAATGGAGATGGTTGGGTTGATGATGCTAATAGTGATTCCTATTCCAGCATGGATAAGGCCCTTTCACAGGAATTAGAGGGTTTTGATTTGGTCCAACATAATTATATTCCCGGATTTATTTCAGGCCTTGATTGTTCAACGCTGCCGGATTATAGTGACATTGGATGGGGTTGA |
| Protein: MASKGPRSRIEHETRARRQKALEAPREPQRPKTHWDHVLEEMVWLSKDFESERKWKLAQAKKVALRATKGMLDQATRGEKKLKEEEHRMRKIALNISKDVKKFWMKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDPHKPVQQSPAQYKLKSPVKEDVNDVDQSLDLNTEADDDFDVNSEEESEDDEQTIEEDEALITAEERQEELAALHSEIDLPLQELLKRYVVQRVSRESSPEKGEDAKESILVPDDNISSAVSRESSTEKGTKESILVVPDDNSKQVSAVSRESSPEKGEDAKESILVPDDNSNNNNNSASNKVETTNSIVRCSNESNGGLSISENRSLDVEATPTRNISESSGELAKEDIPYDFSEEQEDGDFTLAEEEKDDETTLSEEEELAKVDSSNPIDEIALLQKESEIPVEELLARYRQDFSGDDASGDESEYASALSEDLLDSPANQNVEAREESGTKNEVESSPVQGVVNHSAEEEASPDRNFEDGKESENRIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKHPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLRWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMIDGQERVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCRLSRRQRNLYEDFIASSETQATLANANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMCGIDIQLSSSVCSILSTGPFSTIDLKNLGLVFTHLDFSMTSWESDEVQALATPSSLIEELTDQDNLEEVGPFSKHQKNLLGTNIFEEIRKALREERLREAEERAASIAWWNSLRCCRKPVYSTTLCELLTVKHSAFDIQNQKADRRSYSYSSRLVEIILSPVDRFQTVIHLVESFMFVIPAARAPPPVCWCSKTGTSAFLHSTYIEKCAKTLFPLLTPIRPAIVRRQVYFPDRRLIQFDCGKLQELAVLLRRLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLSVKSIQKDKNHNSGMEVSVSNADVEAALKHAEDEADYMALKKVEQEEAVENQEFTEEAMSKLEDDELVNEDDVKADESADQGGCMTTLNKDNRLMFNGGLPIEEKALTFAGKEDDADMLADVKQIAAAAAAAGQAISSFENQLRPIDQYAIRFLELWDPLIDKGAIESEVRFEEAEWELDRIEKYKEEMEAEIDDDEEPLVYEKWDADFATEAYRQQVALAQHQLMEELEYEAKEKELADDGNFDAMNEMVSEPKSKSKKKKKPKKAKFKSLKKGSLSSELKPAKEETKSEPMSIDDDDNSHEELSYSDVVSPSSNGLKKRKKVDMIVHDAEEVKSSKKKPKKSKKPPMELHPVDDPSASRKRNDDCAEVKPCAGLAIELEQKPAGRSRTGGKFSITSMPLKRVLMIKPEKLKKGNIWSRDCVPSPDSWLPQEDAILCAVVHEYGPHWSLVSETLYSMTAGGFYRGRYRHPVHCCERYRELIQRHILAAPDSSVNEKISNAGSGKALLKVTEDNIQMLLNVAAQQPDHELLLQKHFTALLSSVWRVTLRPEHRQSVSTSRNGIRLGGRFVSPFLSHTLQSSAKEPAQRMKFTNLRECSKLLSDALNDASDRQQSDTVSHSDRRYDPVIAESLELTLEIQGDSCDSMNSFPPVINVSIYGSDLVTSINRTPGEDLHLKDSKVVPENRFRAAASACVGGGLGWASSAFPANDSRSRPGSKMQSLGKHKLSVSDTRPKSKLKKASVEHGDVHNLFSEQALQSVTTVSPKDPNLRCDLTSMSNGDGWVDDANSDSYSSMDKALSQELEGFDLVQHNYIPGFISGLDCSTLPDYSDIGWG |